chr17:32611446:A>G Detail (hg19)

Information

Genome

Assembly Position
hg19 chr17:32,611,446-32,611,446
hg38 chr17:34,284,427-34,284,427 View the variant detail on this assembly version.

HGVS

[No Data.]
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

JP HGVD:[No Data.]
ToMMo:0.936
NCBN:[No Data.]
NCBN(Hondo):[No Data.]
NCBN(Ryukyu):[No Data.]
East asia ExAC:[No Data.]

Prediction

ClinVar

Clinical Significance
Review star [No Data.]
Show details
Links
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
[No Data.]
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
0.005 Cerebrovascular accident In the hypertensive group, CCR2 rs1799864, CCR5 rs1799987 and CCL11 rs4795895 we... BeFree 22769019 Detail
0.003 Cerebrovascular accident In the hypertensive group, CCR2 rs1799864, CCR5 rs1799987 and CCL11 rs4795895 we... BeFree 22769019 Detail
0.003 Cerebrovascular accident In the hypertensive group, CCR2 rs1799864, CCR5 rs1799987 and CCL11 rs4795895 we... BeFree 22769019 Detail
<0.001 Ischemic stroke In the non-hypertensive group, CCL11 rs3744508, LTC4S rs730012, FCER1B rs569108,... BeFree 22769019 Detail
<0.001 Ischemic Cerebrovascular Accident In the non-hypertensive group, CCL11 rs3744508, LTC4S rs730012, FCER1B rs569108,... BeFree 22769019 Detail
Annotation

Annotations

DescrptionSourceLinks
In the hypertensive group, CCR2 rs1799864, CCR5 rs1799987 and CCL11 rs4795895 were nominally associa... DisGeNET Detail
In the hypertensive group, CCR2 rs1799864, CCR5 rs1799987 and CCL11 rs4795895 were nominally associa... DisGeNET Detail
In the hypertensive group, CCR2 rs1799864, CCR5 rs1799987 and CCL11 rs4795895 were nominally associa... DisGeNET Detail
In the non-hypertensive group, CCL11 rs3744508, LTC4S rs730012, FCER1B rs569108, TGFB1 rs1800469, LT... DisGeNET Detail
In the non-hypertensive group, CCL11 rs3744508, LTC4S rs730012, FCER1B rs569108, TGFB1 rs1800469, LT... DisGeNET Detail
Gene
-
dbSNP
rs4795895 dbSNP
Genome
hg19
Position
chr17:32,611,446-32,611,446
Variant Type
snv
Reference Allele
A
Alternative Allele
G
ToMMo VCF FILTER column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
PASS
Total VCF ID column value (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
rs4795895
Allele frequency, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
0.9363
Allele count in genotypes, for each ALT allele (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
15693
Total number of alleles in called genotypes (ToMMo 8.3KJPN Allele Frequency Panel(v20200831))
16760
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